| Although most
cases of lung cancer are associated with tobacco
smoking, many lung cancers occur in non-smokers.
The causes of lung carcinoma in non-smokers remain
mysterious, but cancer-causing viruses are among
possible causes. We plan to use a new method to
identify disease-causing microbes, computational
subtraction, to look for viruses that cause bronchoalveolar
carcinoma. This sub-type of lung cancer occurs
most frequently in people who have never smoked,
compared to other lung cancer types. We will take
bronchoalveolar cancer tissue and make libraries
that represent the genes in the cancer tissue.
We will then determine the sequence of DNA in
those genes. This means that we will read the
order of each nucleotide or "letter"
in the DNA and find the exact DNA "words"
that are written in the cancer tissue. We will
then compare these sequences to the sequence of
the human genome. DNA sequences from viruses are
unlikely to match the human sequence. If we find
such sequences, we can test whether possible viruses
are specifically present in multiple cases of
bronchoalveolar carcinoma.
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